read-aligners

Open-source projects categorized as read-aligners
Edit details
Topics: C++ Genomics Bioinformatics
Power Real-Time Data Analytics at Scale
Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
www.influxdata.com
featured

read-aligner Open-Source Projects

  • bowtie2

    A fast and sensitive gapped read aligner

    • Project mention: NHI Genome Studies: Mexico Govt Sept 12 Congressional hearing | /r/genetics | 2023-09-14

    2) Use bowtie2 to align reads against CHM13. This will let you separate human from nonhuman (important, as human sequences are a common contaminant in many nonhuman genomes).

  • bowtie

    An ultrafast memory-efficient short read aligner

  • InfluxDB

    Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

    InfluxDB logo
NOTE: The open source projects on this list are ordered by number of github stars. The number of mentions indicates repo mentiontions in the last 12 Months or since we started tracking (Dec 2020).

read-aligners related posts

  • NHI Genome Studies: Mexico Govt Sept 12 Congressional hearing

    4 projects | /r/genetics | 14 Sep 2023

  • Computationally intensive steps in RNA-seq analysis

    2 projects | /r/bioinformatics | 25 Apr 2021

Index

Project Stars
1 bowtie2 619
2 bowtie 252

Sponsored
SaaSHub - Software Alternatives and Reviews
SaaSHub helps you find the best software and product alternatives
www.saashub.com