Top 10 imaging Open-Source Projects

dicom

1 906 4.2 Go

⚡High Performance DICOM Medical Image Parser in Go.
PhotoSauce

1 549 7.5 C#

MagicScaler high-performance, high-quality image processing pipeline for .NET
InfluxDB

www.influxdata.com featured

Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
itk-wasm

5 180 9.8 Python

High performance spatial analysis in a web browser, Node.js, and across programming languages and hardware architectures
OAD

1 119 6.2 Jupyter Notebook

Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools and AI tools.
PlanktoScope

1 54 8.9 Shell

Open and Affordable Quantitative Imaging Platform

Project mention: PlanktoScope: Open and Affordable Quantitative Imaging Platform | news.ycombinator.com | 2023-10-07

nii2dcm

1 49 8.9 Python

nii2dcm: NIfTI to DICOM creation with Python
OptSys

1 16 2.6 Python

First order ray-optical system simulation (by vishwa91)
SaaSHub

www.saashub.com featured

SaaSHub - Software Alternatives and Reviews. SaaSHub helps you find the best software and product alternatives
attention-cnn-MS-segmentation

1 14 5.0 Python

An attention-based Fully Convolutional Densenet for Multiple Sclerosis lesion segmentation from FLAIR MRI

Project mention: Boosting multiple sclerosis lesion segmentation through attention mechanism | /r/computervision | 2023-06-16

We also released code and dataset (with pre-processing to be ready for training) here: https://github.com/ictlab-unict/attention-cnn-MS-segmentation

BioImager

1 11 8.1 C#

A .NET microscopy imaging application based on Bio library. Supports various microscopes by using imported libraries & GUI automation. Supports XInput game controllers to move stage, take images, run ImageJ macros on images or Bio C# scripts.
ITKIOScanco

1 10 7.0 C++

ITK Image IO for Scanco MicroCT .ISQ files

NOTE: The open source projects on this list are ordered by number of github stars. The number of mentions indicates repo mentiontions in the last 12 Months or since we started tracking (Dec 2020).

imaging related posts

Interesting read about benchmarking image processors

1 project | /r/dotnet | 15 Nov 2022
Anyone know of any microscope that has an API that I can buy. Or in other words, one that I can programmatically control via coding?

2 projects | /r/microscopy | 1 Mar 2022