Top 17 Dicom Open-Source Projects

• Viewers

  0 1,995 8.2 JavaScript

  OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages

  

• cornerstone

  0 1,819 5.4 JavaScript

  JavaScript library to display interactive medical images including but not limited to DICOM (by cornerstonejs)

  

• Appwrite

  appwrite.io

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  Appwrite - The Open Source Firebase alternative introduces iOS support . Appwrite is an open source backend server that helps you build native iOS applications much faster with realtime APIs for authentication, databases, files storage, cloud functions and much more!

  

• pydicom

  1 1,467 7.7 Python

  Read, modify and write DICOM files with python code

  

  Project mention: Varian structure file to training masks | reddit.com/r/MedicalPhysics | 2022-05-12

  Within Radiotherapy AI's product under the hood we use pydicom and skimage.draw.polygon2mask.

• dwv

  1 1,347 9.6 JavaScript

  DICOM Web Viewer: open source zero footprint medical image library.

  Project mention: Dicom File Format Basics | news.ycombinator.com | 2022-07-26

• fo-dicom

  1 833 9.4 C#

  Fellow Oak DICOM for .NET, .NET Core, Universal Windows, Android, iOS, Mono and Unity

  

  Project mention: Any desktop software can convert pdf to DICOM | reddit.com/r/dicom | 2022-01-08

• dcm2niix

  2 523 8.4 C++

  dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC

  

  Project mention: Conversion of DICOM to .nii.gz | reddit.com/r/MRI | 2021-11-17

  When I try to execute the .exe in the link you have provided the program does not run. However, according to this site: https://github.com/rordenlab/dcm2niix! the niix is included in MRIcroGL which I have tried.

• GDCM

  0 287 9.5 C++

  Grassroots DICOM read-only mirror. Only for Pull Request. Please report bug at http://sf.net/p/gdcm

• Scout APM

  scoutapm.com

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  Less time debugging, more time building. Scout APM allows you to find and fix performance issues with no hassle. Now with error monitoring and external services monitoring, Scout is a developer's best friend when it comes to application development.

  

• gdl

  2 219 9.5 C++

  GDL - GNU Data Language

  

  Project mention: GDL: GNU Data Language | reddit.com/r/programming | 2022-05-15

• pymedphys

  2 211 9.7 Python

  A community effort to develop an open standard library for Medical Physics in Python. Building quality transparent software together via peer review and open source distribution. Open code is better science.

  

  Project mention: Medical Physicist in Aus | reddit.com/r/MedicalPhysics | 2022-03-20

  If you happen to be interested in the coding side of things and you'd be interested in being able to have your Master's project code included within PyMedPhys (https://github.com/pymedphys/pymedphys) let me know over there (my GitHub handle is @SimonBiggs).

• dicomviewer

  0 177 6.6 JavaScript

  DICOM Viewer in Nextcloud

• dicom2stl

  1 130 4.1 Python

  Python script to extract a STL surface from a DICOM image series.

  Project mention: Hip implant modeling | reddit.com/r/3Dprinting | 2022-06-15

  All that said, there is a GitHub project that comes up in a rudimentary search, using Python to convert the file to separate STLs for each ‘layer’. This isn’t an endorsement, just acknowledging it exists. https://github.com/dave3d/dicom2stl

• AlizaMS

  1 121 7.2 C++

  DICOM Viewer

  

  Project mention: AlizaMS - A Powerful Lightweight DICOM Viewer | reddit.com/r/coolgithubprojects | 2021-12-28

• MRIcroGL

  1 110 4.7 Python

  v1.2 GLSL volume rendering. Able to view NIfTI, DICOM, MGH, MHD, NRRD, AFNI format images.

  

  Project mention: Dicom File Format Basics | news.ycombinator.com | 2022-07-26

• u-dicom-viewer

  1 95 0.0 JavaScript

  A simple web browser DICOM viewer for any device.

  Project mention: Dicom File Format Basics | news.ycombinator.com | 2022-07-26

• rt-utils

  1 74 6.3 Python

  A minimal Python library to facilitate the creation and manipulation of DICOM RTStructs.

  

  Project mention: Varian structure file to training masks | reddit.com/r/MedicalPhysics | 2022-05-12

• dataset-uta4-dicom

  0 12 0.8 CSS

  [AVI 2020] UTA4: Medical Imaging DICOM files dataset.

  

• prototype-cornerstone

  1 12 5.2 JavaScript

  CornerstoneJS Modified Prototype

  

  Project mention: Answer: PACS integration manually | dev.to | 2021-10-12

  You can follow the "Using CornerstoneJS and Orthanc to Support Deep Learning Projects" instructions for help. Specifically, from the prototype-cornerstone repository, you can see an example of how to connect CornerstoneJS with an Orthanc server. In terms of research purpose, you also have several available related literature [1…

Dicom related posts

• Dicom File Format Basics
  5 projects | news.ycombinator.com | 26 Jul 2022
• Varian structure file to training masks
  3 projects | reddit.com/r/MedicalPhysics | 12 May 2022
• Medical Physicist in Aus
  1 project | reddit.com/r/MedicalPhysics | 20 Mar 2022
• Conversion of DICOM to .nii.gz
  2 projects | reddit.com/r/MRI | 17 Nov 2021
• Answer: PACS integration manually
  1 project | dev.to | 12 Oct 2021
• Trouble with directory/folder permissions and pydicom-medical imaging.
  1 project | reddit.com/r/learnpython | 1 Jun 2021
• Can somebody help me quantify spatial resolution in CT scans of mice?
  1 project | reddit.com/r/bioinformatics | 29 Apr 2021

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