bam

Open-source projects categorized as bam
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Language: + C + D + PowerShell + Crystal + Ruby
Topics: Bioinformatics Genomics Sam Htslib Bcf
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Top 7 bam Open-Source Projects

  • htslib

    C library for high-throughput sequencing data formats

    • Project mention: Gentoo -Os vs -O3 application startup time? | /r/Gentoo | 2023-06-29

  • sambamba

    Tools for working with SAM/BAM data

  • InfluxDB

    Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

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  • Win10

    Win 10/11 related research

  • genozip

    A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/GVF, 23andMe...), up to 5x better than gzip and faster too

  • hts.cr

    HTSlib bindings for Crystal

  • ruby-htslib

    HTSlib bindings for Ruby

  • bam-filter

    Use simple expressions to filter a BAM/CRAM file

  • SaaSHub

    SaaSHub - Software Alternatives and Reviews. SaaSHub helps you find the best software and product alternatives

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NOTE: The open source projects on this list are ordered by number of github stars. The number of mentions indicates repo mentiontions in the last 12 Months or since we started tracking (Dec 2020).

bam related posts

  • Gentoo -Os vs -O3 application startup time?

    2 projects | /r/Gentoo | 29 Jun 2023

  • Does anyone know of a repository for actual genetic data?

    2 projects | /r/genetics | 5 Nov 2022

  • Pigz: A parallel implementation of gzip for multi-core machines

    5 projects | news.ycombinator.com | 17 Oct 2022

  • Tips for scalable workflows on AWS

    3 projects | dev.to | 1 Jul 2022

  • Software Development Project

    2 projects | /r/bioinformatics | 28 Jun 2022

  • Interested in Bioinformatics / C pair-programming opportunity / learning / portfolio project.

    1 project | /r/cscareerquestions | 13 Aug 2021

  • ffi-bitfield

    4 projects | dev.to | 26 Jul 2021
  • A note from our sponsor - InfluxDB
    www.influxdata.com | 11 May 2024
    Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality. Learn more →

Index

What are some of the best open-source bam projects? This list will help you:

Project Stars
1 htslib 776
2 sambamba 554
3 Win10 167
4 genozip 149
5 hts.cr 10
6 ruby-htslib 8
7 bam-filter 5

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