Sambamba Alternatives
Similar projects and alternatives to sambamba
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InfluxDB
Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
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genozip
A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/GVF, 23andMe...), up to 5x better than gzip and faster too
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SaaSHub
SaaSHub - Software Alternatives and Reviews. SaaSHub helps you find the best software and product alternatives
NOTE:
The number of mentions on this list indicates mentions on common posts plus user suggested alternatives.
Hence, a higher number means a better sambamba alternative or higher similarity.
sambamba reviews and mentions
Posts with mentions or reviews of sambamba.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2022-12-14.
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where to start?
Yeah the D programming language, https://dlang.org/ one of my favorite languages to program in. It's unfortunately not used a lot in bioinformatics, and deserves more attention in my opinion. E.g. sambamba for working with sam/bam files is written in it (https://github.com/biod/sambamba) it's one of the most performant tools for working with NGS data because it uses async io and fibers.
Stats
Basic sambamba repo stats
1
554
6.5
8 months ago
biod/sambamba is an open source project licensed under GNU General Public License v3.0 only which is an OSI approved license.
The primary programming language of sambamba is D.
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