pindel

Pindel can detect breakpoints of large deletions, medium sized insertions, inversions, tandem duplications and other structural variants at single-based resolution from next-gen sequence data. It uses a pattern growth approach to identify the breakpoints of these variants from paired-end short reads. (by genome)
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Pindel Alternatives

Similar projects and alternatives to pindel

NOTE: The number of mentions on this list indicates mentions on common posts plus user suggested alternatives. Hence, a higher number means a better pindel alternative or higher similarity.
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pindel reviews and mentions

Posts with mentions or reviews of pindel. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2022-09-12.

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Basic pindel repo stats
1
144
10.0
over 4 years ago

genome/pindel is an open source project licensed under GNU General Public License v3.0 only which is an OSI approved license.

The primary programming language of pindel is C++.

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