pindel
Pindel can detect breakpoints of large deletions, medium sized insertions, inversions, tandem duplications and other structural variants at single-based resolution from next-gen sequence data. It uses a pattern growth approach to identify the breakpoints of these variants from paired-end short reads. (by genome)
freBayes
By freebayes
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
pindel
Posts with mentions or reviews of pindel.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2022-09-12.
freBayes
Posts with mentions or reviews of freBayes.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2022-09-12.
What are some alternatives?
When comparing pindel and freBayes you can also consider the following projects:
dragen-variant-calling - Variant calling pipeline for the Illumina Dragen platform