Libdna Alternatives
Similar projects and alternatives to libdna based on common topics and language
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WorkOS
The modern identity platform for B2B SaaS. The APIs are flexible and easy-to-use, supporting authentication, user identity, and complex enterprise features like SSO and SCIM provisioning.
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InfluxDB
Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
NOTE:
The number of mentions on this list indicates mentions on common posts plus user suggested alternatives.
Hence, a higher number means a better libdna alternative or higher similarity.
libdna reviews and mentions
Posts with mentions or reviews of libdna.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2023-04-06.
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A good, fast hash for nucleotides triplet converted to 0, 1, 3, 2 using `3 & (nuc << 1)`
While that works for the canonical bases your method won't support CCN which should give Proline. Hence, for my implementation I have opted for a slower but more general approach. As protein coding sequences are usually short performance isn't an issue, really.
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Counting the number of matching characters in two ASCII strings
In Bioinformatics, if you now the number of mismatching characters between two strings of DNA your can compute their evolutionary distance. As DNA is long, easily a few megabytes, computing such a hamming distance via SIMD really pays of. Here is my implementation if anyone is interested: https://github.com/kloetzl/libdna
Stats
Basic libdna repo stats
2
20
7.4
2 months ago
kloetzl/libdna is an open source project licensed under MIT License which is an OSI approved license.
The primary programming language of libdna is C.
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