Ipyigv Alternatives

Similar projects and alternatives to ipyigv

tinycov

1 13 1.5 Python ipyigv VS tinycov

Command line tool to plot genomic coverage from a BAM file
igv-jupyter

1 154 1.8 JavaScript ipyigv VS igv-jupyter

Extension for Jupyter which integrates igv.js
InfluxDB

www.influxdata.com featured

Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
pybamview

1 56 10.0 Python ipyigv VS pybamview

Browser based application for viewing bam alignments
dash-bio

2 514 3.7 Python ipyigv VS dash-bio

Open-source bioinformatics components for Dash
igv-notebook

1 56 5.0 JavaScript ipyigv VS igv-notebook

Module for embedding igv.js in an IPython notebook
SaaSHub

www.saashub.com featured

SaaSHub - Software Alternatives and Reviews. SaaSHub helps you find the best software and product alternatives

NOTE: The number of mentions on this list indicates mentions on common posts plus user suggested alternatives. Hence, a higher number means a better ipyigv alternative or higher similarity.

Suggest an alternative to ipyigv

ipyigv reviews and mentions

Posts with mentions or reviews of ipyigv. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2023-06-30.

Bam viewer with custom fasta reference that's embeddable in Streamlit app?
6 projects | /r/bioinformatics | 30 Jun 2023

ipyigv is the lower level version of these. I found no documentation on how it's supposed to be used, but I'll try to get it to work as a last option, maybe raising a new webserver\docker container and supplying the files to it.

Stats

Basic ipyigv repo stats

Mentions

Stars

Activity

10.0

Last Commit

over 3 years ago

jupyter-widgets-contrib/ipyigv is an open source project licensed under BSD 3-clause "New" or "Revised" License which is an OSI approved license.

The primary programming language of ipyigv is Python.