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InfluxDB
Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
I came across this project recently, it may give you some ideas: https://github.com/MTrajK/virus-spreading
3blue1brown uses the custom-built manim to handle illustrations. As the Youtube video notes, the code for that particular video can be found at https://github.com/3b1b/videos/blob/master/_2020/sir.py
NOTE:
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Hence, a higher number means a more popular project.