Reference request: single cell RNA seq papers where cells originate from multiple individuals where the individual of origin was explicitly accounted for in the model?

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human-cell-atlas single-cell-rna-seq single-cell-genomics cran

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  • MAST

    Tools and methods for analysis of single cell assay data in R

    • The test.use='MAST' option is an option in seurat findmarkers which can add covariates. And is maybe possible to use directly specifying random effects 1, 2.

  • seurat

    R toolkit for single cell genomics

    • The test.use='MAST' option is an option in seurat findmarkers which can add covariates. And is maybe possible to use directly specifying random effects 1, 2.

  • InfluxDB

    Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

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NOTE: The number of mentions on this list indicates mentions on common posts plus user suggested alternatives. Hence, a higher number means a more popular project.

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