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If you don't have access to a computer, you can always use https://send.djazz.se/ which is my preferred way to sending epub files to my Kobo, especially because I usually scroll through fics on my phone. Epub files are converted to kepub upon transfer.
If you don't want to use Calibre at all, you can also convert epub to kepub using https://pgaskin.net/kepubify/ and then sideload the kepub file you get manually on your Kobo
If you're using Calibre, there is fanficfare that can grab and update the files from Ao3. Can grab from Fanficfare-github. I also rec the Kobo touch extended and kobo utilities. I keep a epub and kepub copy as storage isn't an issue for me, but I believe there's a way to have it convert on transfer.