Python Fasta

Open-source Python projects categorized as Fasta

Top 3 Python Fastum Projects

  • pyfaidx

    Efficient pythonic random access to fasta subsequences

  • FastaParser

    A Python FASTA file Parser and Writer.

  • InfluxDB

    Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

    InfluxDB logo
  • biomisc

    collection of miscellaneous command line bioinformatic scripts

NOTE: The open source projects on this list are ordered by number of github stars. The number of mentions indicates repo mentiontions in the last 12 Months or since we started tracking (Dec 2020).

Python Fasta related posts

  • Is there a way to achieve a similar COG annotation for Haloferax mediterranei?

    1 project | /r/bioinformatics | 10 Apr 2023
  • Is there a way to achieve a similar COG annotation for Haloferax mediterranei?

    1 project | /r/proteomics | 10 Apr 2023
  • parse a fasta file using regex

    2 projects | /r/bioinformatics | 28 Sep 2022
  • Why do some HMMs come with a separate score table instead of embedding in as cut_ga, cut_tc, or cut_nc?

    1 project | /r/bioinformatics | 19 Jun 2022
  • Problems using Prokka

    2 projects | /r/bioinformatics | 29 Mar 2022
  • How would you name the program that does cog annotation?

    1 project | /r/AskReddit | 11 Mar 2022
  • A note from our sponsor - SaaSHub
    www.saashub.com | 3 May 2024
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Index

What are some of the best open-source Fastum projects in Python? This list will help you:

Project Stars
1 pyfaidx 440
2 FastaParser 17
3 biomisc 7

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