stringr VS cheatsheets

Perhaps str_extract_all() from stringr? (since you're already using dplyr)

There are base R ways of finding strings grep(), as well as packages such as {stringer} (cheat sheet available here: https://stringr.tidyverse.org/)

If you're unfamiliar with regex, it may help you review the stringr cheat sheet: https://stringr.tidyverse.org/

Without knowing more, it seems likely that some combination of stringr and fuzzyjoin will be what you need.

Search for info about the grepl-function and read the cheat sheet from the stringr-package, that should get you started: https://stringr.tidyverse.org/

Looks like you have a misunderstanding about the right-most column. Don't think of the cell values as vectors of length=N elements, c("gene1", "gene2", ..."geneN"). Instead, think of each cell as a character string (vector of length=1), "gene 1, gene 2, ... geneN". Finding specific sequence of characters within a string is different from finding matching elements of vectors. Without changing the column, you can use regular expressions and base R string functions and/or stringr if you're more comfortable with tidyverse.

If you're an R user, stringr + its cheatsheet gets you very close to remembering what to do without needing to look further!

For more information on how to use ggplot2 and create charts consult the ggplot2 official page or the ggplot2 cheat graphic.

I'd suggest you have a look at cheatsheets (or download them from GitHub) if you want to get to know your way around a package or set if functions, it saves you a lot of time.

You could use geom_hline and geom_vline, geom_abline, or geom_segment for this. (The ggplot cheat sheet is very useful for answering these kinds of questions, BTW.)

I can't say for sure because I don't know what your ultimate aim is for your visualization. Check out the cheat sheet for ggplot2 here.

Finally just do your analysis. You should also should give a try and see the cheat sheet for data importing on the tidyverse package.

That said, when I’m trying to come up with an interesting way to visualize data, I find the ggplot cheat sheet very helpful: https://github.com/rstudio/cheatsheets/raw/main/data-visualization-2.1.pdf

Here's a cheat sheet: https://github.com/rstudio/cheatsheets/blob/main/strings.pdf

The cheat sheet of the stringr package should give you good overview of string manipulation/ regex in R.

I would very highly recommend that rather than trying to get started by translating an existing graph, you check out some documentation about ggplot first. If nothing else, the ggplot cheat sheet from RStudio should help explain what the component parts of the code are, and that might help you figure out what you actually want to do.