splink VS duckdb

https://github.com/moj-analytical-services/splink

Record linkage has been a big part of a project I've been working on for 6 months now. I personally think a great and free solution be using the splink package in Python which can handle 10+m rows which implements the Fellegi-Sunter model (equivalent to a naive-Bayes model) is the classical model in record linkage. It can be trained in an unsupervised manner using some initial parameter estimation (these are quite intuitive) and then expectation maximisation. The features in the model will be different pairwise string comparisons on your field of interest. These can include exact equality; edit distance comparisons like Levensthein distance and Jaro-Winkler; and phonetic comparisons like soundex and double metaphone. The splink pacakge will handle training the model and then all the graph theory at the end to connect all your links into clusters. All the details you'll need are in the links. https://www.robinlinacre.com/probabilistic\_linkage/ https://moj-analytical-services.github.io/splink/

https://moj-analytical-services.github.io/splink/ is a FOSS python package (but it runs against your db using SQL).

If you're curious, I've written a FOSS record linkage library that executes everything as SQL. It supports multiple SQL backends including DuckDB and Spark for scale, and runs faster than most competitors because it's able to leverage the speed of these backends: https://github.com/moj-analytical-services/splink

Splink - a python library for probabilistic record linkage (fuzzy matching/entity resolution).

Splink is dramatically faster and works on much larger datasets than other open source libraries. I'm particularly proud of the fact we support multiple execution backends (at the moment, DuckDb Spark Athena and Sqlite, but additional adaptors are relatively straightforward to write).

We've had >4 million pypi downloads and it's used in government, academia and the private sector, often replacing extremely expensive proprietary solutions.

https://github.com/moj-analytical-services/splink

More info in blog posts here:

Splink is a SQL tool that can do this https://github.com/moj-analytical-services/splink

Probabilistic record matching model such as a Fellegi-Sunter. Check out the splink package in Python.

Main docs here: https://moj-analytical-services.github.io/splink

It'd be great to see Splink add value in this area! Do give us a shout if you have any questions. The best place to post is on the Github discussions: https://github.com/moj-analytical-services/splink/discussions

I'm not sure if the fix is reassuring or not: https://github.com/duckdb/duckdb/pull/9411/files

It's an interesting question!

The problem is that the data is spread everywhere - no choice about that. So with that in mind, how do you query that data? Today, the idea is that you HAVE to put it into a central location. With tools like Bacalhau[1] and DuckDB [2], you no longer have to - a single query can be sharded amongst all your data - EFFECTIVELY giving you a lot of what you want from a data lake.

It's not a replacement, but if you can do a few of these items WITHOUT moving the data, you will be able to see really significant cost and time savings.

[1] https://github.com/bacalhau-project/bacalhau

[2] https://github.com/duckdb/duckdb

[4] Switch to Push-Based Execution Model by Mytherin · Pull Request #2393 · duckdb/duckdb (github.com)

it depends on your query obviously.

In general, I did very deep benchmarking of pg, clickhouse and duckdb, and I sure didn't make stupid mistakes like this: https://news.ycombinator.com/item?id=36990831

My dataset has 50B rows and 2tb of data, and I think columnar dbs are very overhiped and I chose pg because:

- pg performance is acceptable, maybe 2-3x times slower than clickhouse and duckdb on some queries if pg is configured correctly and run on compressed storage

- clickhouse and duckdb start falling apart very fast because they specialized on very narrow type of queries: https://github.com/ClickHouse/ClickHouse/issues/47520 https://github.com/ClickHouse/ClickHouse/issues/47521 https://github.com/duckdb/duckdb/discussions/6696

This action installs duckdb with the version provided in input.

Duckdb: https://github.com/duckdb/duckdb - seems pretty popular, been keeping an eye on this for close to a year now.

The Parquet-Go library is very complex, not yet success to use it. So I ask whether DuckDB can provide API https://github.com/duckdb/duckdb/issues/7776