pyrodigal
Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD! (by althonos)
DNA-to-Amino-Acid-Converter
This program breaks apart a DNA string and dispalys each amino acid associated with each codon (by srusher)
| pyrodigal | DNA-to-Amino-Acid-Converter | |
|---|---|---|
| 1 | 1 | |
| 122 | 0 | |
| - | - | |
| 8.7 | 10.0 | |
| 9 days ago | over 3 years ago | |
| Cython | Java | |
| GNU General Public License v3.0 only | - |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
pyrodigal
Posts with mentions or reviews of pyrodigal.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2023-06-19.
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DNA to amino acid sequence?
True! I believe bakta relies on this python implementation of prodigal for translation https://github.com/althonos/pyrodigal
DNA-to-Amino-Acid-Converter
Posts with mentions or reviews of DNA-to-Amino-Acid-Converter.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2023-06-19.
What are some alternatives?
When comparing pyrodigal and DNA-to-Amino-Acid-Converter you can also consider the following projects:
Prodigal - Prodigal Gene Prediction Software
cyvcf2 - cython + htslib == fast VCF and BCF processing
DNA-to-Protein-sequence - Translate a string containing a nucleotide sequence(DNA) into a string containing the corresponding sequence of amino acids.
MultiQC - Aggregate results from bioinformatics analyses across many samples into a single report.
orfipy - Fast and flexible ORF finder
pybase64 - Fast Base64 encoding/decoding in Python
masurca