pyrodigal VS pybase64

Compare pyrodigal vs pybase64 and see what are their differences.

pyrodigal

Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD! (by althonos)
orf-finder metagenomes Python bioconda python-library cython-wrapper python-interface prodigal Genome gene-finding Bioinformatics Simd
Source Code
pyrodigal.readthedocs.org
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pybase64

Fast Base64 encoding/decoding in Python (by mayeut)
Base64 Simd Python python-library
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pyrodigal pybase64
1 1
122 121
- -
8.7 8.7
9 days ago 4 days ago
Cython Python
GNU General Public License v3.0 only BSD 2-clause "Simplified" License
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

pyrodigal

Posts with mentions or reviews of pyrodigal. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2023-06-19.

pybase64

Posts with mentions or reviews of pybase64. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2023-07-03.

What are some alternatives?

When comparing pyrodigal and pybase64 you can also consider the following projects:

Prodigal - Prodigal Gene Prediction Software

base64-avx512 - Code for paper "Base64 encoding and decoding at almost the speed of a memory copy"

cyvcf2 - cython + htslib == fast VCF and BCF processing

optimization-demo - :zap: Optimizing Python code by implementing a C++ extension

MultiQC - Aggregate results from bioinformatics analyses across many samples into a single report.

python-benedict - :blue_book: dict subclass with keylist/keypath support, built-in I/O operations (base64, csv, html, ini, json, pickle, plist, query-string, toml, xls, xml, yaml), s3 support and many utilities.

orfipy - Fast and flexible ORF finder

DNA-to-Protein-sequence - Translate a string containing a nucleotide sequence(DNA) into a string containing the corresponding sequence of amino acids.

DNA-to-Amino-Acid-Converter - This program breaks apart a DNA string and dispalys each amino acid associated with each codon

masurca

pyrodigal vs Prodigal pybase64 vs base64-avx512 pyrodigal vs cyvcf2 pybase64 vs optimization-demo pyrodigal vs MultiQC pybase64 vs python-benedict pyrodigal vs orfipy pyrodigal vs DNA-to-Protein-sequence pyrodigal vs DNA-to-Amino-Acid-Converter pyrodigal vs masurca