ploomber
mercury
ploomber | mercury | |
---|---|---|
121 | 77 | |
3,380 | 3,779 | |
0.5% | 1.0% | |
7.4 | 8.5 | |
25 days ago | 17 days ago | |
Python | Python | |
Apache License 2.0 | GNU Affero General Public License v3.0 |
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
ploomber
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Show HN: JupySQL – a SQL client for Jupyter (ipython-SQL successor)
- One-click sharing powered by Ploomber Cloud: https://ploomber.io
Documentation: https://jupysql.ploomber.io
Note that JupySQL is a fork of ipython-sql; which is no longer actively developed. Catherine, ipython-sql's creator, was kind enough to pass the project to us (check out ipython-sql's README).
We'd love to learn what you think and what features we can ship for JupySQL to be the best SQL client! Please let us know in the comments!
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Runme – Interactive Runbooks Built with Markdown
For those who don't know, Jupyter has a bash kernel: https://github.com/takluyver/bash_kernel
And you can run Jupyter notebooks from the CLI with Ploomber: https://github.com/ploomber/ploomber
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Rant: Jupyter notebooks are trash.
Develop notebook-based pipelines
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Who needs MLflow when you have SQLite?
Fair point. MLflow has a lot of features to cover the end-to-end dev cycle. This SQLite tracker only covers the experiment tracking part.
We have another project to cover the orchestration/pipelines aspect: https://github.com/ploomber/ploomber and we have plans to work on the rest of features. For now, we're focusing on those two.
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New to large SW projects in Python, best practices to organize code
I recommend taking a look at the ploomber open source. It helps you structure your code and parameterize it in a way that's easier to maintain and test. Our blog has lots of resources about it from testing your code to building a data science platform on AWS.
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A three-part series on deploying a Data Science Platform on AWS
Developing end-to-end data science infrastructure can get complex. For example, many of us might have struggled to try to integrate AWS services and deal with configuration, permissions, etc. At Ploomber, we’ve worked with many companies in a wide range of industries, such as energy, entertainment, computational chemistry, and genomics, so we are constantly looking for simple solutions to get them started with Data Science in the cloud.
- Ploomber Cloud - Parametrizing and running notebooks in the cloud in parallel
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Is Colab still the place to go?
If you like working locally with notebooks, you can run via the free tier of ploomber, that'll allow you to get the Ram/Compute you need for the bigger models as part of the free tier. Also, it has the historical executions so you don't need to remember what you executed an hour later!
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Alternatives to nextflow?
It really depends on your use cases, I've seen a lot of those tools that lock you into a certain syntax, framework or weird language (for instance Groovy). If you'd like to use core python or Jupyter notebooks I'd recommend Ploomber, the community support is really strong, there's an emphasis on observability and you can deploy it on any executor like Slurm, AWS Batch or Airflow. In addition, there's a free managed compute (cloud edition) where you can run certain bioinformatics flows like Alphafold or Cripresso2
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Saving log files
That's what we do for lineage with https://ploomber.io/
mercury
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Ask HN: What's the best charting library for customer-facing dashboards?
I'm build dashboards in Jupyter Lab. My plotting libraries are Altair, matplotlib, seaborn, Plotly - all work well in notebook.
My favorite is Altair. It provides interactivity for charts, so you can move/zoom your plots and have tooltips. It is much lighter than Plotly after saving the notebook to ipynb file. Altair charts looks much better than in matplotlib. One drawback, that exporting to PDF doesn't work. To serve notebook as dashboard with code hidden, I use Mercury framework, you can check example https://runmercury.com/tutorials/vega-altair-dashboard/
disclaimer: I'm author of Mercury framework https://github.com/mljar/mercury
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mercury VS solara - a user suggested alternative
2 projects | 13 Oct 2023
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Show HN: Web App with GUI for AutoML on Tabular Data
Web App is using two open-source packages that I've created:
- MLJAR AutoML - Python package for AutoML on tabular data https://github.com/mljar/mljar-supervised
- Mercury - framework for converting Jupyter Notebooks into Web App https://github.com/mljar/mercury
You can run Web App locally. What is more, you can adjust notebook's code for your needs. For example, you can set different validation strategies or evalutaion metrics or longer training times. The notebooks in the repo are good starting point for you to develop more advanced apps.
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streamlit VS mercury - a user suggested alternative
2 projects | 8 Jul 2023
- GitHub - mljar/mercury: Convert Jupyter Notebooks to Web Apps
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[P] Opinionated Web Framework for Converting Jupyter Notebooks to Web Apps
The GitHub repository https://github.com/mljar/mercury
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Show HN: Opinionated Web Framework for Converting Jupyter Notebooks to Web Apps
We are working on open-source web framework Mercury that converts Python notebooks to Web Apps.
It is very opinionated:
- it has no callbacks - we automatically re-execute cells below updated widget
- it has no layout widgets, all input widgets are always in the left sidebar
Thanks to above decisions you don't need to change notebook's code to have web app and fit to the framework.
The simplicity of the framework is very important to us. We also care about deployment simplicity. That's why we created a shared hosting service called Mercury Cloud. You can deploy notebook by uploading a file.
The GitHub repository https://github.com/mljar/mercury
Documentation https://RunMercury.com/docs/
Mercury Cloud https://cloud.runmercury.com
- Show HN: Build Web Apps in Jupyter Notebook with Python Only
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[OC] Analyzing 15,963 Job Listings to Uncover the Top Skills for Data Analysts (update)
Analysis was done in Jupyter Notebook with Python 3.10, Pandas, Matplotlib, wordcloud and Mercury framework.
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[OC] Data Analyst Skills in need based on 15,963 job listings
Analysis was done in Jupyter Notebook with Python 3.10 kernel, Pandas, Matplotlib, wordcloud and Mercury framework to share notebook as a web application with widgets and code hidden. Gif created in Canva.
What are some alternatives?
Kedro - Kedro is a toolbox for production-ready data science. It uses software engineering best practices to help you create data engineering and data science pipelines that are reproducible, maintainable, and modular.
streamlit - Streamlit — A faster way to build and share data apps.
papermill - 📚 Parameterize, execute, and analyze notebooks
voila - Voilà turns Jupyter notebooks into standalone web applications
dagster - An orchestration platform for the development, production, and observation of data assets.
dvc - 🦉 ML Experiments and Data Management with Git
voila-gridstack - Dashboard template for Voilà based on GridStackJS
argo - Workflow Engine for Kubernetes
jupytext - Jupyter Notebooks as Markdown Documents, Julia, Python or R scripts
MLflow - Open source platform for the machine learning lifecycle
awesome-streamlit - The purpose of this project is to share knowledge on how awesome Streamlit is and can be