pagoda2 vs too-many-cells

With SurveyJS form UI libraries, you can build and style forms in a fully-integrated drag & drop form builder, render them in your JS app, and store form submission data in any backend, inc. PHP, ASP.NET Core, and Node.js.

surveyjs.io

featured

InfluxDB - Power Real-Time Data Analytics at Scale

Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

www.influxdata.com

featured

pagoda2		too-many-cells
	Project
2	Mentions	-
191	Stars	100
2.1%	Growth	-
5.3	Activity	4.5
2 months ago	Latest Commit	5 months ago
JavaScript	Language	Haskell
-	License	GNU General Public License v3.0 only

The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

pagoda2

Posts with mentions or reviews of pagoda2. We have used some of these posts to build our list of alternatives and similar projects.

GOterm analysis in Seurat
1 project | /r/bioinformatics | 6 Aug 2022

Try pagoda2 for this: https://github.com/kharchenkolab/pagoda2
Seurat Vs Pagoda2 For Scrnaseq Analysis
1 project | /r/bioinformatics | 4 Jan 2021

I realize that this is a bit old, but I find pagoda2 faster: https://github.com/kharchenkolab/pagoda2

too-many-cells

Posts with mentions or reviews of too-many-cells. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning too-many-cells yet.
Tracking mentions began in Dec 2020.

What are some alternatives?

When comparing pagoda2 and too-many-cells you can also consider the following projects:

seurat - R toolkit for single cell genomics

subsample - Subsample data from a uniform distribution so two different statuses for the same entity have the same number of samples.

scanpy - Single-cell analysis in Python. Scales to >1M cells.

collapse-duplication - Process the output of heatitup in order to collapse sequences into clones by similar ITD mutations.

kana - Single cell analysis in the browser

integreat - Integrate difference data sources and optionally perform differential integration.

alevin-fry - 🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.

normalize - normalize

heatitup-complete - Find and annotate ITDs with assembly or read pair joining using suffix trees and characterize the exogenous segments within the spacer using heat diffusion. A layer on top of heatitup for additional functionality such as working with BAM files directly.

tex-join-bib - Compile separate tex files with the same bibliography.

BiobaseEnsembl - Ensembl related functions and datastructures

birch-beer - Generate a tree for displaying a hierarchy of groups with colors, scaling, and more.