org-thesis
citar
org-thesis | citar | |
---|---|---|
8 | 33 | |
495 | 458 | |
- | 1.1% | |
2.6 | 5.8 | |
about 2 years ago | 5 days ago | |
Emacs Lisp | Emacs Lisp | |
- | GNU General Public License v3.0 only |
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org-thesis
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Is emacs the answer?
I have used Org mode in tandem with LaTeX for displaying inline statistical equations when taking notes for data science topics and have found it works very well, although I am by no means a LaTeX expert. I have, however, read where Ph.D students have used Org mode to write their theses using LaTeX.
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Org: Include but only headers?
Check out https://github.com/dangom/org-thesis
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Writing papers/thesis in org with a barebone config
Not barebones, but I would consider looking at scimax, which is an emacs configuration that likely is similar to your work flow. You can also look to PhD theses written in org-mode and shared on github, there are a few with sensible configurations you might want to just copy.
- Text snippets for use in multiple documents?
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org-mode equivalent of asciidoc tags?
The include has the ability to specify lines. Here is an article I saved that goes into how this could be used for a thesis and reuse parts for journal articles. That sounds similar to your use case. https://github.com/dangom/org-thesis
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Emacs org-mode examples and cookbook (2017)
As a sibling parent mentioned, you can tag an element by inserting it into it's own heading and adding the :ignore: tag.
I feel this functionality is overlooked, and it is in my opinion one of the most powerful features implemented in org, as it allows you to add "meta" groupings to your org document without any effect on the content.
Without the :ignore: tag, there is a strict semantic relation between org-mode document headings, as physically indicated by the * at the beginning of a line, and the corresponding hierarchical level of the heading's content.
With the :ignore: tag, however, you separate content from form. Headings with :ignore: work just as headings for your file.org document: you can search for headings, link to them, add IDs and properties and whatever else you can do with headings. But when you export your document, the heading no longer exists and thus has no impact on the hierarchical level of its content.
Why is this interesting? Well, because if content is separated from form, we can build things where the same content assume multiple forms depending on whatever context we define.
I used this in combination with other org-mode tags, "#+exclude_tags" and "#+include" directives to build my Ph.D. thesis with org mode and have my thesis chapters be exportable both as thesis chapters as well as standalone publications. Shameless plug: https://github.com/dangom/org-thesis
It should be straightforward to extend the idea to presentations and other formats as well.
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Where shall I go next? Please give me some guidance you Yodas of emacs.
https://github.com/dangom/org-thesis (org mode phd solution) https://write.as/dani/writing-a-phd-thesis-with-org-mode (explaining his solution)
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Can we use Org mode to write books and generate EPUB and MOBI files?
I wrote my thesis with org mode and wrote about it here: https://write.as/dani/writing-a-phd-thesis-with-org-mode. Repo here: https://github.com/dangom/org-thesis
citar
- Keeping track of paper notes using Emacs, BiBTeX and Citar
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Good Emacs Packages
If you're a researcher, I highly recommend citar.
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Org-roam, zotero, and org-noter workflow for scientific research and citations (+bibtex)?
If you have info on what you're looking for there, post 'em here.
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Org-noter is under new maintainership with the first MELPA update since 2019
I maintain citar and have had some questions (this is the recent one) about org-noter integration. Let us know if any input!
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Org Mode Citation and Footnote Features
In fact this functionality already exists in the Citar package -- it's called citar-capf.
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Org package recommendations for Cross Referencing
I recently decided to try switching to more built-in options such as the new built-in org-cite syntax. I am using the package citar for this (yes, I know org-ref can also be changed to use the new built-in syntax).
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Why use Emacs for LaTeX instead of Overleaf?
If you need citations, having Citar at your disposal is crazy nice.
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Non-programmers who use EMacs
Very very cool. Awesome to see so many authors using org-mode. Have you seen citar for finding and inserting citations?
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Literature Notes
OK, I just pushed a commit that allows one to configure that default function to leave the space out.
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Emacs and knowledge management for scientists
The citar package, which I created, has note integration packages available for both org-roam and denote (along with zk).
What are some alternatives?
tufte-org-mode - An Org mode environment for producing Tufte-LaTeX books and handouts
org-ref - org-mode modules for citations, cross-references, bibliographies in org-mode and useful bibtex tools to go with it.
vim-orgmode - Text outlining and task management for Vim based on Emacs' Org-Mode
helm-bibtex - Search and manage bibliographies in Emacs
CrossLine - CrossLine is an outliner with sophisticated cross-link capabilities in the tradition of the well-respected Ecco Pro
doom-emacs - An Emacs framework for the stubborn martian hacker [Moved to: https://github.com/doomemacs/doomemacs]
scimax - An emacs starterkit for scientists and engineers
consult-bibtex - Emacs bibtex-completion through consulting-read
ox-leanpub - Org-mode exporter for Leanpub books - mirrored from GitLab
org-roam-bibtex - Org Roam integration with bibliography management software
ox-epub - Org mode epub export
biblio.el - Browse and import bibliographic references from CrossRef, DBLP, HAL, arXiv, Dissemin, and doi.org from Emacs