opensim-core
nanopolish
| opensim-core | nanopolish | |
|---|---|---|
| 1 | 1 | |
| 736 | 542 | |
| 0.8% | - | |
| 9.9 | 5.2 | |
| 5 days ago | 9 months ago | |
| C++ | C++ | |
| Apache License 2.0 | MIT License |
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
opensim-core
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[Question] Visual Studio Error: 'OpenSim': has already been defined to be a namespace
True. The namespace is correct and it should be called "OpenSim". I do not know how and when I put OpenSim class definition in OpenSim.h header file, but that is the problem. The original header does not have those lines there.
nanopolish
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ONT Frustration
I use nanopore for de novo methylation motif detection and some ssDNA signal comparison. Tombo has not worked with R10 data for me, so I’ll have to revisit that. Nanocompore uses Nanopolish for signal comparison, which does not support R10 data (see github).
What are some alternatives?
mfem - Lightweight, general, scalable C++ library for finite element methods
edlib - Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.
virtualbow - Software for designing and simulating bows
megahit - Ultra-fast and memory-efficient (meta-)genome assembler
qvge - Qt Visual Graph Editor
bowtie - An ultrafast memory-efficient short read aligner
Simbody - High-performance C++ multibody dynamics/physics library for simulating articulated biomechanical and mechanical systems like vehicles, robots, and the human skeleton.
salmon - 🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
awesome-biomechanics - A curated, public list of resources for biomechanics and human motion analysis: datasets, processing tools, software for simulation, educational videos, lectures, etc.
stellarium - Stellarium is a free GPL software which renders realistic skies in real time with OpenGL. It is available for Linux/Unix, Windows and macOS. With Stellarium, you really see what you can see with your eyes, binoculars or a small telescope.
FreeCAD - This is the official source code of FreeCAD, a free and opensource multiplatform 3D parametric modeler.