odinson
Odinson is a powerful and highly optimized open-source framework for rule-based information extraction. Odinson couples a simple, yet powerful pattern language that can operate over multiple representations of text, with a runtime system that operates in near real time. (by lum-ai)
awesome-bioie
🧫 A curated list of resources relevant to doing Biomedical Information Extraction (including BioNLP) (by caufieldjh)
Our great sponsors
| odinson | awesome-bioie | |
|---|---|---|
| 3 | 1 | |
| 66 | 300 | |
| - | - | |
| 4.5 | 2.1 | |
| about 2 months ago | about 1 year ago | |
| Scala | ||
| Apache License 2.0 | Creative Commons Zero v1.0 Universal |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
odinson
Posts with mentions or reviews of odinson.
We have used some of these posts to build our list of alternatives
and similar projects.
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[D] Finetuning for text extraction (e.g. scientific sources)
Odinson
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Odinson: A fast rule-based information extraction framework [pdf]
One of a rare few papers I've seen that has a github link to it's work. ;) Good job on the Project Overview there too[1]!
https://github.com/lum-ai/odinson#project-overview
- Odinson, a powerful and highly optimized framework for information extraction
awesome-bioie
Posts with mentions or reviews of awesome-bioie.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2023-12-22.
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Snomed CT Entity Linking Challenge
> The objective of this competition is to link spans of text in clinical notes with specific topics in the SNOMED CT clinical terminology. Participants will train models based on real-world doctor's notes which have been de-identified and annotated with SNOMED CT concepts by medically trained professionals. This is the largest publicly available dataset of labelled clinical notes, and you can be one of the first to use it!
NER: Named Entity Recognition: https://en.wikipedia.org/wiki/Named-entity_recognition
awsome-medical-coding-nlp: https://github.com/acadTags/Awesome-medical-coding-NLP
awesome-ehr-deep-learning: https://github.com/hurcy/awesome-ehr-deeplearning
awesome-ner: https://github.com/smiyawaki0820/awesome-ner
awesome-bioie > Research groups: https://github.com/caufieldjh/awesome-bioie#groups-active-in...
SNOMED-CT as RDF: https://sphn-semantic-framework.readthedocs.io/en/latest/ext...
What are some alternatives?
When comparing odinson and awesome-bioie you can also consider the following projects:
awesome-document-understanding - A curated list of resources for Document Understanding (DU) topic