Snomed CT Entity Linking Challenge

This page summarizes the projects mentioned and recommended in the original post on news.ycombinator.com

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  • Awesome-medical-coding-NLP

    A collection of papers on automated medical coding from free-texts

  • > The objective of this competition is to link spans of text in clinical notes with specific topics in the SNOMED CT clinical terminology. Participants will train models based on real-world doctor's notes which have been de-identified and annotated with SNOMED CT concepts by medically trained professionals. This is the largest publicly available dataset of labelled clinical notes, and you can be one of the first to use it!

    NER: Named Entity Recognition: https://en.wikipedia.org/wiki/Named-entity_recognition

    awsome-medical-coding-nlp: https://github.com/acadTags/Awesome-medical-coding-NLP

    awesome-ehr-deep-learning: https://github.com/hurcy/awesome-ehr-deeplearning

    awesome-ner: https://github.com/smiyawaki0820/awesome-ner

    awesome-bioie > Research groups: https://github.com/caufieldjh/awesome-bioie#groups-active-in...

    SNOMED-CT as RDF: https://sphn-semantic-framework.readthedocs.io/en/latest/ext...

  • awesome-ehr-deeplearning

    Curated list of awesome papers for electronic health records(EHR) mining, machine learning, and deep learning.

  • > The objective of this competition is to link spans of text in clinical notes with specific topics in the SNOMED CT clinical terminology. Participants will train models based on real-world doctor's notes which have been de-identified and annotated with SNOMED CT concepts by medically trained professionals. This is the largest publicly available dataset of labelled clinical notes, and you can be one of the first to use it!

    NER: Named Entity Recognition: https://en.wikipedia.org/wiki/Named-entity_recognition

    awsome-medical-coding-nlp: https://github.com/acadTags/Awesome-medical-coding-NLP

    awesome-ehr-deep-learning: https://github.com/hurcy/awesome-ehr-deeplearning

    awesome-ner: https://github.com/smiyawaki0820/awesome-ner

    awesome-bioie > Research groups: https://github.com/caufieldjh/awesome-bioie#groups-active-in...

    SNOMED-CT as RDF: https://sphn-semantic-framework.readthedocs.io/en/latest/ext...

  • InfluxDB

    Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

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  • awesome-ner

    This repository groups together for the task of "Named Entity Recognition (NER)"

  • > The objective of this competition is to link spans of text in clinical notes with specific topics in the SNOMED CT clinical terminology. Participants will train models based on real-world doctor's notes which have been de-identified and annotated with SNOMED CT concepts by medically trained professionals. This is the largest publicly available dataset of labelled clinical notes, and you can be one of the first to use it!

    NER: Named Entity Recognition: https://en.wikipedia.org/wiki/Named-entity_recognition

    awsome-medical-coding-nlp: https://github.com/acadTags/Awesome-medical-coding-NLP

    awesome-ehr-deep-learning: https://github.com/hurcy/awesome-ehr-deeplearning

    awesome-ner: https://github.com/smiyawaki0820/awesome-ner

    awesome-bioie > Research groups: https://github.com/caufieldjh/awesome-bioie#groups-active-in...

    SNOMED-CT as RDF: https://sphn-semantic-framework.readthedocs.io/en/latest/ext...

  • awesome-bioie

    🧫 A curated list of resources relevant to doing Biomedical Information Extraction (including BioNLP)

  • > The objective of this competition is to link spans of text in clinical notes with specific topics in the SNOMED CT clinical terminology. Participants will train models based on real-world doctor's notes which have been de-identified and annotated with SNOMED CT concepts by medically trained professionals. This is the largest publicly available dataset of labelled clinical notes, and you can be one of the first to use it!

    NER: Named Entity Recognition: https://en.wikipedia.org/wiki/Named-entity_recognition

    awsome-medical-coding-nlp: https://github.com/acadTags/Awesome-medical-coding-NLP

    awesome-ehr-deep-learning: https://github.com/hurcy/awesome-ehr-deeplearning

    awesome-ner: https://github.com/smiyawaki0820/awesome-ner

    awesome-bioie > Research groups: https://github.com/caufieldjh/awesome-bioie#groups-active-in...

    SNOMED-CT as RDF: https://sphn-semantic-framework.readthedocs.io/en/latest/ext...

NOTE: The number of mentions on this list indicates mentions on common posts plus user suggested alternatives. Hence, a higher number means a more popular project.

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