kmer-cnt
Code examples of fast and simple k-mer counters for tutorial purposes (by lh3)
kcounter
A simple package for counting DNA k-mers in Python. Written in Rust. (by apcamargo)
kmer-cnt | kcounter | |
---|---|---|
1 | 1 | |
159 | 6 | |
- | - | |
0.0 | 3.8 | |
about 4 years ago | 7 months ago | |
C++ | Rust | |
MIT License | GNU General Public License v3.0 only |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
kmer-cnt
Posts with mentions or reviews of kmer-cnt.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2021-09-10.
kcounter
Posts with mentions or reviews of kcounter.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2021-09-10.
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I wrote a fast kmer counter in Rust called krust. I would love for people to get use out of it and for me to get feedback! Thanks and all the best!
That's very cool! I also wrote a k-mer counter in Rust some time ago, but it is distributed as a Python library: https://github.com/apcamargo/kcounter
What are some alternatives?
When comparing kmer-cnt and kcounter you can also consider the following projects:
krust - counts k-mers, written in rust