bulk-rnaseq
Bulk RNA-seq analysis. (by latch-verified)
diff-exp
Differential expression analysis. (by latch-verified)
| bulk-rnaseq | diff-exp | |
|---|---|---|
| 2 | 1 | |
| 32 | 9 | |
| - | - | |
| 4.8 | 5.0 | |
| 6 months ago | 7 months ago | |
| Python | Python | |
| MIT License | - |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
bulk-rnaseq
Posts with mentions or reviews of bulk-rnaseq.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2022-09-07.
-
Generate GUIs and deploy bioinformatics workflows with python
Here is the link if you want too look yourself: https://github.com/latch-verified/bulk-rnaseq/releases/tag/v0.0.317
- I've been really frustrated with picking the right tools for bulk RNA-seq, so I did a long literature review and wrote this workflow
diff-exp
Posts with mentions or reviews of diff-exp.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2022-08-04.
-
I've been really frustrated with picking the right tools for bulk RNA-seq, so I did a long literature review and wrote this workflow
I actually wrapped DESeq2 after comparing some tools! (https://github.com/latch-verified/diff-exp)
What are some alternatives?
When comparing bulk-rnaseq and diff-exp you can also consider the following projects:
rnaseq - RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.