bioconvert
Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another. (by bioconvert)
pestalotiopsis
Assembly and phylogentic analysis pipeline for draft genome of a Pestalotiopsis fungi. (by EverymanBio)
| bioconvert | pestalotiopsis | |
|---|---|---|
| 1 | 1 | |
| 376 | 7 | |
| 0.0% | - | |
| 6.1 | 0.0 | |
| over 1 year ago | over 3 years ago | |
| Python | Python | |
| GNU General Public License v3.0 only | GNU General Public License v3.0 only |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
bioconvert
Posts with mentions or reviews of bioconvert.
We have used some of these posts to build our list of alternatives
and similar projects.
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found a script in a file i was sent and I'm wondering what exactly it does.
Hmm, so this sed construct seems to be used in a project called "bioconvert" for compressing fasta files.
pestalotiopsis
Posts with mentions or reviews of pestalotiopsis.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2021-12-26.
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Sequencing your DNA with a USB dongle and open source code
That's not true. I just did a high-quality sequence and assembly of a new species of fungus from my home lab using nanopore. You can see all my code used for assembly and analysis that will be referenced in a paper I plan to publish in Jan here: https://github.com/EverymanBio/pestalotiopsis
What are some alternatives?
When comparing bioconvert and pestalotiopsis you can also consider the following projects:
malware-phylogeny - malware phylogeny for WSO web shell, Shellbot IRC bot and algorithm
DNABERT - DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome
Flye - De novo assembler for single molecule sequencing reads using repeat graphs
deepvariant - DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
Sniffles - Structural variation caller using third generation sequencing