bioinformatics
Bioinformatic algorithms for the UCLA Bioinformatics Specialization (by ashinzekene)
masurca
By alekseyzimin
| bioinformatics | masurca | |
|---|---|---|
| 1 | 1 | |
| 3 | 230 | |
| - | - | |
| 6.5 | 3.5 | |
| 7 months ago | 3 months ago | |
| Python | M4 | |
| - | GNU General Public License v3.0 only |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
bioinformatics
Posts with mentions or reviews of bioinformatics.
We have used some of these posts to build our list of alternatives
and similar projects.
-
Coding
https://github.com/ashinzekene/bioinformatics This requires more coding skills but goes over some common algorithms in bioinformatics
masurca
Posts with mentions or reviews of masurca.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2022-05-10.
-
Nanopore long read assembly help!
Hybrid assembly: https://github.com/alekseyzimin/masurca
What are some alternatives?
When comparing bioinformatics and masurca you can also consider the following projects:
OSGenome - An Open Source Web Application for Genetic Data (SNPs) using 23AndMe and Data Crawling Technologies
deepvariant - DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
Genome - Genome Network Ala Neural Network
mag - Assembly and binning of metagenomes
Trycycler - A tool for generating consensus long-read assemblies for bacterial genomes
NanoSim - Nanopore sequence read simulator
aviary - A hybrid assembly and MAG recovery pipeline (and more!)
dash - Data Apps & Dashboards for Python. No JavaScript Required.
pyrodigal - Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!