ProteinStructurePrediction VS progen

Compare ProteinStructurePrediction vs progen and see what are their differences.

ProteinStructurePrediction

Protein structure prediction is the task of predicting the 3-dimensional structure (shape) of a protein given its amino acid sequence and any available supporting information. In this section, we will Install and inspect sidechainnet, a dataset with tools for predicting and inspecting protein structures, complete two simplified implementations of Attention based Networks for predicting protein angles from amino acid sequences, and visualize our predictions along the way. (by victor369basu)
3D AI attention-mechanism Bioinformatics Data Science Machine Learning Medical Protein protein-structure Python3 Pytorch Transformer
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progen

Official release of the ProGen models (by salesforce)
language-model Protein generative-model
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ProteinStructurePrediction progen
1 6
9 558
- 3.6%
0.0 0.0
over 1 year ago 9 months ago
Python Python
MIT License BSD 3-clause "New" or "Revised" License
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ProteinStructurePrediction

Posts with mentions or reviews of ProteinStructurePrediction. We have used some of these posts to build our list of alternatives and similar projects.

progen

Posts with mentions or reviews of progen. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2023-05-13.

What are some alternatives?

When comparing ProteinStructurePrediction and progen you can also consider the following projects:

Avolition2 - 3D action-RPG game for Linux/Windows/MacOS written in Python3 based on Panda3D engine

deepblast - Neural Networks for Protein Sequence Alignment

openfold - Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

esm - Evolutionary Scale Modeling (esm): Pretrained language models for proteins

NoLabs - Open source biolab

alphafold - Open source code for AlphaFold.

reCOGnizer - A tool for domain based annotation with databases from the Conserved Domains Database

Biopython - Official git repository for Biopython (originally converted from CVS)

basaran - Basaran is an open-source alternative to the OpenAI text completion API. It provides a compatible streaming API for your Hugging Face Transformers-based text generation models.

ProteinStructurePrediction vs Avolition2 progen vs deepblast ProteinStructurePrediction vs openfold progen vs esm ProteinStructurePrediction vs NoLabs progen vs alphafold progen vs reCOGnizer progen vs Biopython progen vs basaran