MultiQC vs tm_calculator_gui

MultiQC

Aggregate results from bioinformatics analyses across many samples into a single report. (by MultiQC)

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multiqc.info

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tm_calculator_gui

Calculates the melting temperature(in Celsius) of a user imported forward and reverse primer based on primer blast default parameters & pcr additives (by olgatsiouri1996)

Primer melting-temperature Bioinformatics Python GUI

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MultiQC		tm_calculator_gui
	Project
5	Mentions	1
1,173	Stars	1
1.5%	Growth	-
9.7	Activity	4.2
4 days ago	Latest Commit	11 months ago
JavaScript	Language	Python
GNU General Public License v3.0 only	License	MIT License

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MultiQC

Posts with mentions or reviews of MultiQC. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2023-12-09.

R pipelines for bulk RNA-seq analyses
3 projects | /r/bioinformatics | 9 Dec 2023

fastp + multiQC + Salmon + DESeq2 all some nextflow workflow. It is a good exercise (not complicated) to create the pipeline from scratch the first time to properly understand each tool.
RNA-seq analysis
1 project | /r/bioinformatics | 16 Nov 2022

I would recommend looking at the pages for FastQC and MultiQC. I run FastQC on my fastq files, then MultiQC on them to collect all that individual data into one report. You can also use MultiQC to analyze the quality of your alignments, at least after using STAR aligner (probably others too, I just have only used STAR aligned).
How to use MultiQC? I am trying to run it to compile the summary from my FASTQC but I keep getting the "Sample has no read" error.
2 projects | /r/bioinformatics | 18 Aug 2021

If that all checks out then I would have to see more of your files in order to help, sorry. Submitting the issue at https://github.com/ewels/MultiQC/issues would help you more
How can I keep Docker MultiQC from ignoring my large files?
1 project | /r/bioinformatics | 17 Aug 2021

I have seen this Github thread, but it is not applicable for me because I am not running MultiQC natively, I am running a docker version of it in HPC.

tm_calculator_gui

Posts with mentions or reviews of tm_calculator_gui. We have used some of these posts to build our list of alternatives and similar projects.

tm_calculator_gui: Calculates the melting temperature(in Celsius) of a user imported forward and reverse primer. It chooses between 2 algorithms: 1. basic Tm calculation based on nucleotide content 2. Tm calculation algorith based on salt concetration(such as in primer blast). Avaliable as GUI exe
1 project | /r/labrats | 24 Aug 2021

What are some alternatives?

When comparing MultiQC and tm_calculator_gui you can also consider the following projects:

finviz - Unofficial API for finviz.com

dash - Data Apps & Dashboards for Python. No JavaScript Required.

Sooty - The SOC Analysts all-in-one CLI tool to automate and speed up workflow.

Biopython - Official git repository for Biopython (originally converted from CVS)

awesome-single-cell - Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

PyBluesky - Cross-platform 2D python game developed with pygame. This is capable of running in windows, linux and android

pyrodigal - Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!

PDBaser - Protein preparation for MD, made faster and easier !

Osintgram - Osintgram is a OSINT tool on Instagram. It offers an interactive shell to perform analysis on Instagram account of any users by its nickname

Sniffles - Structural variation caller using third generation sequencing

clinker - Gene cluster comparison figure generator