Genbank vs BioHMM

Genbank

Genbank format tools and parser (by eggzilla)

BioHMM

Libary containing parsing and visualisation functions and datastructures for Hidden Markov Models in HMMER3 format. (by eggzilla)

Specific Industries Bioinformatics

Source Code

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Genbank		BioHMM
	Project
-	Mentions	-
10	Stars	3
-	Growth	-
0.0	Activity	0.0
over 2 years ago	Latest Commit	almost 7 years ago
Haskell	Language	Haskell
LicenseRef-GPL	License	GNU General Public License v3.0 only

The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

Genbank

Posts with mentions or reviews of Genbank. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning Genbank yet.
Tracking mentions began in Dec 2020.

BioHMM

Posts with mentions or reviews of BioHMM. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning BioHMM yet.
Tracking mentions began in Dec 2020.

What are some alternatives?

When comparing Genbank and BioHMM you can also consider the following projects:

uniprot-kb - UniProt-KB format parser

ViennaRNAParser

samtools - [Moved to: https://github.com/ingolia/SamTools]

rank-product - Collects the functions pertaining to finding the rank product of a data set as well as the associated p-value.

bioinformatics-toolkit - A collection of bioinformatics algorithms

vcf - Haskell library to handle VCF (Variant Call Format) files

SelectSequencesFromMSA - Tool to select representative sequences from a multiple sequence alignment

Taxonomy - Haskell cabal Taxonomy libary contains tools, parsers, datastructures and visualisation for the NCBI (National Center for Biotechnology Information) Taxonomy datasources.

mmtf - MMTF for Haskell

phybin - Binning (Newick) Phylogenetic Trees by Topology

hPDB - PDB parser in Haskell