Genbank vs samtools

Genbank

Genbank format tools and parser (by eggzilla)

Specific Industries Bioinformatics

Source Code

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samtools

[Moved to: https://github.com/ingolia/SamTools] (by ingolia)

Specific Industries Bioinformatics Samtools

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Genbank		samtools
	Project
-	Mentions	-
10	Stars	10
-	Growth	-
0.0	Activity	0.0
over 2 years ago	Latest Commit	almost 8 years ago
Haskell	Language	C
LicenseRef-GPL	License	MIT License

The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

Genbank

Posts with mentions or reviews of Genbank. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning Genbank yet.
Tracking mentions began in Dec 2020.

samtools

Posts with mentions or reviews of samtools. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning samtools yet.
Tracking mentions began in Dec 2020.

What are some alternatives?

When comparing Genbank and samtools you can also consider the following projects:

uniprot-kb - UniProt-KB format parser

ViennaRNAParser

bioinformatics-toolkit - A collection of bioinformatics algorithms

seqtk - Toolkit for processing sequences in FASTA/Q formats

libdna - ♥ Essential Functions for DNA Manipulation

Taxonomy - Haskell cabal Taxonomy libary contains tools, parsers, datastructures and visualisation for the NCBI (National Center for Biotechnology Information) Taxonomy datasources.

RNAlien - RNAlien - unsupervised RNA family model construction

phybin - Binning (Newick) Phylogenetic Trees by Topology

bio-sequence

BlastHTTP - Haskell cabal libary for submission and result retrieval from the NCBI Blast REST webservice