BioHMM VS ViennaRNAParser

Compare BioHMM vs ViennaRNAParser and see what are their differences.

BioHMM

Libary containing parsing and visualisation functions and datastructures for Hidden Markov Models in HMMER3 format. (by eggzilla)
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BioHMM ViennaRNAParser
0 0
3 3
- -
0.0 0.0
almost 7 years ago over 6 years ago
Haskell Haskell
GNU General Public License v3.0 only GNU General Public License v3.0 only
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.

BioHMM

Posts with mentions or reviews of BioHMM. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning BioHMM yet.
Tracking mentions began in Dec 2020.

ViennaRNAParser

Posts with mentions or reviews of ViennaRNAParser. We have used some of these posts to build our list of alternatives and similar projects.

We haven't tracked posts mentioning ViennaRNAParser yet.
Tracking mentions began in Dec 2020.

What are some alternatives?

When comparing BioHMM and ViennaRNAParser you can also consider the following projects:

FormalGrammars - Context-free and linear grammars in Haskell (parsing, pretty-printing, embedded DSL)

hPDB - PDB parser in Haskell

Forestry - Science and craft of forests

phybin - Binning (Newick) Phylogenetic Trees by Topology

RNAlien - RNAlien - unsupervised RNA family model construction

ADPfusionForest - Dynamic programming on tree and forest structures

Gene-CluEDO - Gene Cluster Evolution Determined Order

rank-product - Collects the functions pertaining to finding the rank product of a data set as well as the associated p-value.

ClustalParser - Parse output of Clustal tools

samtools - [Moved to: https://github.com/ingolia/SamTools]

MutationOrder - most likely order of mutation events in RNA

cmv - Visualize HMMs, CMs and their comparisons