BioExplorer
nextclade
BioExplorer | nextclade | |
---|---|---|
6 | 2 | |
62 | 199 | |
- | 2.5% | |
9.2 | 9.8 | |
29 days ago | 4 days ago | |
C++ | TypeScript | |
GNU General Public License v3.0 only | MIT License |
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BioExplorer
nextclade
- Why does musl make my Rust code so slow? (2020)
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For SARS-CoV-2 genomic analysis, what is the difference in utility of a Pangolin Lineage versus a NextClade Clade (e.g. lineage B.1.617.2 vs clade 21A)?
Lineage and clade assignments--especially by Pangolin and Nextclade, respectively--seem to be the most popular way to characterize SARS-CoV-2 genomes and so I'm wondering how these two concepts are applied differently to inform our understanding of the pandemic.
What are some alternatives?
covid-19-api - A JavaScript library that provides a simple API for the Johns Hopkins University CSSE COVID-19 time series data.
pangolin - Software package for assigning SARS-CoV-2 genome sequences to global lineages.
covid19_scenarios - Models of COVID-19 outbreak trajectories and hospital demand
fastp - An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
Covid19 - COVID 19 - React Native app for displaying your country's stats on Corona Virus available on Android, iOS and Web
relion - Image-processing software for cryo-electron microscopy
tinyrenderer - A brief computer graphics / rendering course
iTeribus - Un'applicazione per la creazione e la compilazione automatica dei moduli di autodichiarazione COVID 19.
CoreNeuron - Simulator optimized for large scale neural network simulations.
k8s-folding-at-home - ⛑ Run folding@home on your Kubernetes cluster