Top 8 quality-control Open-Source Projects

fastp

9 1,775 4.7 C++

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

Project mention: R pipelines for bulk RNA-seq analyses | /r/bioinformatics | 2023-12-09

fastp + multiQC + Salmon + DESeq2 all some nextflow workflow. It is a good exercise (not complicated) to create the pipeline from scratch the first time to properly understand each tool.

kneaddata

1 100 3.1 Python

Quality control tool on metagenomic and metatranscriptomic sequencing data, especially data from microbiome experiments.
InfluxDB

www.influxdata.com featured

Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
mpvQC

1 44 8.3 QML

libmpv based application for quality control of videos
magento2-grumphp

1 11 0.0

Ultimate GrumPHP configuration for Magento 2 automated code quality checks
reports-check-action

1 10 9.7 TypeScript

Bug Reports (GitHub Issues) Quality Checker

Project mention: Bug Reports (GitHub Issues) Quality Checker | news.ycombinator.com | 2024-03-12

brimstone-recorder

2 3 0.0 JavaScript

Brimstone is a chrome extension. It is a codeless/scriptless web application test recorder, test player and pixel-perfect test validator all in one. Automated testing with no coding required!
chipseq-smk-pipeline

2 3 6.3 Python

ChIP-Seq processing pipeline on snakemake
SaaSHub

www.saashub.com featured

SaaSHub - Software Alternatives and Reviews. SaaSHub helps you find the best software and product alternatives
tech-debt

1 2 0.0 Python

Technical debt happens when low code quality slows new developments : you have to pay time interests. TechDebt allows you to quantify and track your technical debt.

NOTE: The open source projects on this list are ordered by number of github stars. The number of mentions indicates repo mentiontions in the last 12 Months or since we started tracking (Dec 2020).

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