Top 7 phylogenetic-tree Open-Source Projects

ggtree

2 799 6.5 R

:christmas_tree:Visualization and annotation of phylogenetic trees
pyCirclize

6 610 8.6 Python

Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)
InfluxDB

www.influxdata.com featured

Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
pyCircos

5 307 3.0 Python

python Circos
phylophlan

1 112 6.9 Python

Precise phylogenetic analysis of microbial isolates and genomes from metagenomes
graphlan

1 79 0.0 Python

High-quality circular representations of taxonomic and phylogenetic trees
taxopedia

4 7 0.0 Python

Taxonomic trees (cladograms) from Wikipedia-scraped data.
ielex-data-and-tree

1 6 10.0 Python

Data and scripts for producing a Baysian phylogenetic tree sample of for the Indo-European family which is "good enough", using data from IELex (Dunn et al. 2011).
SaaSHub

www.saashub.com featured

SaaSHub - Software Alternatives and Reviews. SaaSHub helps you find the best software and product alternatives

NOTE: The open source projects on this list are ordered by number of github stars. The number of mentions indicates repo mentiontions in the last 12 Months or since we started tracking (Dec 2020).

phylogenetic-trees related posts

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1 project | /r/bioinformatics | 14 Dec 2022
How would one code a graphic, chronogramatic display, of a timeline in concentric circles, instead of linear parallels? Alternately, a spiral, with "phase" giving "day and month"?

1 project | /r/learnpython | 31 Jul 2021