Veba Alternatives

Similar projects and alternatives to veba

gatk4-genome-processing-pipeline-azure

4 7 0.0 wdl veba VS gatk4-genome-processing-pipeline-azure

Workflows used for processing whole genome sequence data + germline variant calling.
InfluxDB

www.influxdata.com featured

Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

NOTE: The number of mentions on this list indicates mentions on common posts plus user suggested alternatives. Hence, a higher number means a better veba alternative or higher similarity.

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veba reviews and mentions

Posts with mentions or reviews of veba. We have used some of these posts to build our list of alternatives and similar projects. The last one was on 2022-11-01.

Best way to document tool?
2 projects | /r/bioinformatics | 1 Nov 2022
Is it ok to merge metagenome assemblies from two different assemblers?
1 project | /r/bioinformatics | 20 Oct 2022

Check out slides 7-10 here (I just made a presentation describing this). If that doesn't help, please skim through Astrobio Mike's blog post because it describes it in more detail.
VEBA: a modular end-to-end suite for in silico recovery, clustering, and analysis of prokaryotic, microeukaryotic, and viral genomes from metagenomes (My most meaningful contribution to science thus far)
1 project | /r/bioinformatics | 12 Oct 2022

If you think this would be helpful for your research, give it a try (https://github.com/jolespin/veba)! If you have any trouble installing, let me know and I will gladly help debug; though, I've tested it several times. Currently, there's documentation on installation, modules, walkthroughs of workflows, and frequently asked questions.
A note from our sponsor - InfluxDB
www.influxdata.com | 14 May 2024

Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality. Learn more →