Htscodecs Alternatives
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NOTE:
The number of mentions on this list indicates mentions on common posts plus user suggested alternatives.
Hence, a higher number means a better htscodecs alternative or higher similarity.
htscodecs reviews and mentions
Posts with mentions or reviews of htscodecs.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2023-04-22.
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Worries about tANS?
rANS SIMD block based : htscodecs
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Bioinformatics Software Developer Tools / Infrastructure Ideas
If I was pitching more at graduate level I'd say write the container format only and call the htscodecs reference implementations for the compression (just the custom codecs, the regular ones GZIP, LZMA and BZ2 algorithms will already have implementations in most languages). That would probably be a masters thesis (6 months) level project with proper supervision.
Stats
Basic htscodecs repo stats
2
26
7.2
7 days ago
samtools/htscodecs is an open source project licensed under GNU General Public License v3.0 or later which is an OSI approved license.
The primary programming language of htscodecs is C.
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