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SaaSHub
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adcomp reviews and mentions
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Nix: Taming Unix with Functional Programming
Are any of your R users TMB users? Because I ran into that in multiple setups (Guix SD and Guix on foreign distros) where only a specific ordering worked even when using guix shell --pure. This was back in the R 4.1.2 days. In theory it should be impossible and yet I ran into it. No I was not mixing packages installed via. install.packages.
Right now with the latest version of Guix and R 4.2.1 TMB is not usable. Try running:
"guix shell --container r r-tmb make gcc-toolchain gfortran-toolchain"
then try running the linreg.R (with the corresponding cpp file, or any of the examples) example from https://github.com/kaskr/adcomp/tree/master/tmb_examples
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Useful Algorithms That Are Not Optimized by Jax, PyTorch, or TensorFlow
There is no free lunch:).
I remember spending a summer using Template Model Builder (TMB), which is a useful R/C++ automatic differentiation (AD) framework, for working with accelerated failure time models. For these models, the survival to time T given covariates X is defined by S(t|X) = P(T>t|X) = S_0(t exp(-beta^T X)) for baseline survival S_0(t). I wanted to use splines for the baseline survival and then use AD for gradients and random effects. Unfortunately, after implementing the splines in template C++, I found a web page entitled "Things you should NOT do in TMB" (https://github.com/kaskr/adcomp/wiki/Things-you-should-NOT-d...) - which included using if statements that are based on coefficients. In this case, the splines for S_0 depend on beta, which is this specific excluded case:(. An older framework (ADMB) did not have this constraint, but dissemination of code was more difficult. Finally, PyTorch did not have an implementation of B-splines or an implementation for Laplace's approximation. Returning to my opening comment, there is no free lunch.
Stats
kaskr/adcomp is an open source project licensed under GNU General Public License v3.0 or later which is an OSI approved license.
The primary programming language of adcomp is C++.
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