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MACS Alternatives
Similar projects and alternatives to MACS based on common topics and language
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InfluxDB
Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
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NOTE:
The number of mentions on this list indicates mentions on common posts plus user suggested alternatives.
Hence, a higher number means a better MACS alternative or higher similarity.
MACS reviews and mentions
Posts with mentions or reviews of MACS.
We have used some of these posts to build our list of alternatives
and similar projects.
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Can i cluster or PCA ChIP peak score from different TFs to see which TFs have similar targets?
Maybe not? Have a look at this: https://github.com/macs3-project/MACS/issues/123
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Big trouble installing macs2
Try making a conda env using their install instructions and then adding the package last (https://github.com/macs3-project/MACS/blob/master/docs/INSTALL.md). I haven't used this package before, but it looks finicky, so be patient trying to set it up on your system
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What is the meaning of the ATACseq score?
That’s a MACS2 narrowPeak file. You can see the file spec here: https://github.com/macs3-project/MACS/blob/master/docs/callpeak.md
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A note from our sponsor - InfluxDB
www.influxdata.com | 10 May 2024
Stats
Basic MACS repo stats
3
682
9.4
7 days ago
macs3-project/MACS is an open source project licensed under BSD 3-clause "New" or "Revised" License which is an OSI approved license.
The primary programming language of MACS is Cython.
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