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My Syncthing Tray (https://github.com/Martchus/syncthingtray) can cope with Syncthing being started independently of it just fine. There's no installer, just a self-contained executable. If you use its internal launcher nevertheless (instead of a system service) then its auto start feature could cover Syncthing as well and you can start/stop Syncthing from the tray. (That is therefore the intended use on Windows where service integration hasn't been implemented yet).
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