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With this separation, I backup all config files to GitHub and have a cron job to backup all data and rsync it to other machines.
You do want to be aware of a chicken/egg problem when doing this though. I have Drone setup to auto push to a Github repository for this reason, using this image: https://github.com/appleboy/drone-git-push/blob/master/DOCS.md
NOTE:
The number of mentions on this list indicates mentions on common posts plus user suggested alternatives.
Hence, a higher number means a more popular project.