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we keep a fork there if you prefer to use github (https://github.com/zrythm/zrythm) but we don't actually use github for development
if you really want to use github pull requests instead of sending patches feel free to do that and I'll still look at them but we recommend patches via email because it's an open and standard system
this is on the radar, what you are asking for is similar to lv2apply I guess
you can already run guile scripts via the command line so you could run a few plugins and process audio if you wanted to assuming all the necessary API is exposed but I haven't really tried that yet
for now, I recommend kuriborosu as well https://github.com/falkTX/kuriborosu/
have you seen the pedalboard project? Might get you the outcome you're after if you want to dabble in python.
https://github.com/spotify/pedalboard