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You don't need a USB file system for a convenient dev experience. In fact you can achieve an even more integrated experience with Rust today, on essentially any Cortex-M microcontroller if you set up probe-run. It makes cargo run flash and run the code on your microcontroller and can even be invoked with rust-analyzer's run button or an IDE command.
NOTE:
The number of mentions on this list indicates mentions on common posts plus user suggested alternatives.
Hence, a higher number means a more popular project.