Free download of Mastering Python for Bioinformatics

This page summarizes the projects mentioned and recommended in the original post on /r/bioinformatics

InfluxDB - Power Real-Time Data Analytics at Scale
Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.
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  • biofx_python

    Code for Mastering Python for Bioinformatics (O'Reilly, 2021, ISBN 9781098100889)

  • I'm the author of a new book from O'Reilly called Mastering Python for Bioinformatics. You can download a PDF of the preface and first chapter. The first 14 chapters tackle basic bioinformatics problems from Rosalind.info, and the final 5 chapters work through examples of more complicated programs I've written. The goal is for you to write your own versions of the programs using test-driven development with the tests I provide. This will to teach you how to write a well-structured, documented, tested Python program that leverages type hints and the use of tools like pylint, flake8, pytest, and mypy. All the code, data, and tests are freely available in my GitHub repo.

  • InfluxDB

    Power Real-Time Data Analytics at Scale. Get real-time insights from all types of time series data with InfluxDB. Ingest, query, and analyze billions of data points in real-time with unbounded cardinality.

    InfluxDB logo
NOTE: The number of mentions on this list indicates mentions on common posts plus user suggested alternatives. Hence, a higher number means a more popular project.

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