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xournalpp
Xournal++ is a handwriting notetaking software with PDF annotation support. Written in C++ with GTK3, supporting Linux (e.g. Ubuntu, Debian, Arch, SUSE), macOS and Windows 10. Supports pen input from devices such as Wacom Tablets.
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InfluxDB
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On Linux, Xournal++ is the best thing that can do inking. https://github.com/xournalpp/xournalpp
Saber Notes looks like it has promise, depending how it is developed in the future. https://github.com/adil192/saber
NOTE:
The number of mentions on this list indicates mentions on common posts plus user suggested alternatives.
Hence, a higher number means a more popular project.
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