TypeScript Genomic Projects

jbrowse-components

1 186 9.7 TypeScript

Source code for JBrowse 2, a modern React-based genome browser

Project mention: A measure of test flakiness - proportion of main branch CI failures | /r/SoftwareEngineering | 2023-05-10

just for context, I am part of an open source project for genomics (university funded) and i am pretty much the only active dev, but others contribute and work on related stuff (for ref, our github https://github.com/gmod/jbrowse-components). the app is about 100k lines of code, with a bunch of dependencies. i do care a lot about performance and consider it a bad thing that CI is slow/flaky. i don't necessarily see that the app itself is substantially slow when i use it in the browser, so i don't really understand the CI slowness. i do continuously work on performance of the main app, and reduce e.g. bundle size for smaller js payloads (e.g. see https://jbrowse.org/jb2/blog/2022/12/16/yearinreview/). I suspect that there is a component of this issue that is due to our jest stuff specifically being slow, but it will take time to profile:)

gnomad-browser

15 78 9.7 TypeScript

Explore gnomAD datasets on the web

Project mention: All identified polymorphisms in a given gene, how to find? | /r/genetics | 2023-06-14

SurveyJS

surveyjs.io sponsored

Open-Source JSON Form Builder to Create Dynamic Forms Right in Your App. With SurveyJS form UI libraries, you can build and style forms in a fully-integrated drag & drop form builder, render them in your JS app, and store form submission data in any backend, inc. PHP, ASP.NET Core, and Node.js.

NOTE: The open source projects on this list are ordered by number of github stars. The number of mentions indicates repo mentiontions in the last 12 Months or since we started tracking (Dec 2020).