Converting 23&Me raw data into a format usable by Admixtools 2

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  • glactools

    command-line tools for the management of genotype likelihoods and allele counts

  • I've tried working on solving this on my own for hours now (with the help of ChatGPT lol) but the furthest that I got was trying to use something called glactools (which can apparently convert 23andme data to ACF files and then to eigenstrat format), but I wasn't able to get it running on my mac because my filesystem probably needs a complete reset at this point and I'm not very good with bash.

  • gnomad-browser

    Explore gnomAD datasets on the web

  • try one of these: GnomAD (https://gnomad.broadinstitute.org/) 1000 Genomes (http://browser.1000genomes.org) dbSNP (http://www.ncbi.nlm.nih.gov/snp)

  • SurveyJS

    Open-Source JSON Form Builder to Create Dynamic Forms Right in Your App. With SurveyJS form UI libraries, you can build and style forms in a fully-integrated drag & drop form builder, render them in your JS app, and store form submission data in any backend, inc. PHP, ASP.NET Core, and Node.js.

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