Jupyter Notebook graph-neural-networks

Open-source Jupyter Notebook projects categorized as graph-neural-networks
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Pytorch Deep Learning pytorch-geometric Machine Learning geometric-deep-learning
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Top 8 Jupyter Notebook graph-neural-network Projects

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graph-neural-networks

  1. benchmarking-gnns

    Repository for benchmarking graph neural networks (JMLR 2023)

  2. AppSignal

    AppSignal knows why the f*#k it crashed. Stop vibe-debugging. Every exception, every backtrace, grouped so you see patterns, not noise.

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  3. ktrain

    ktrain is a Python library that makes deep learning and AI more accessible and easier to apply

  4. graphein

    Protein Graph Library

  5. geometric-gnn-dojo

    Geometric GNN Dojo provides unified implementations and experiments to explore the design space of Geometric Graph Neural Networks (ICML 2023)

  6. indaba-pracs-2022

    Notebooks for the Practicals at the Deep Learning Indaba 2022.

  7. lagrangebench

    LagrangeBench: A Lagrangian Fluid Mechanics Benchmarking Suite

  8. netsci-labs

    (In progress) Network science laboratories. Covers graph theory, random graphs and ML on graphs

  9. SaaSHub

    SaaSHub - Software Alternatives and Reviews. SaaSHub helps you find the best software and product alternatives

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  10. Topological-Reinforcement-Operator

    A neuro-inspired computational framework for modeling memory consolidation in neural networks, with applications from toy models to human connectomics.

    Project mention: Memory consolidation via network parsimony: 96x faster than PageRank | news.ycombinator.com | 2025-10-12
NOTE: The open source projects on this list are ordered by number of github stars. The number of mentions indicates repo mentiontions in the last 12 Months or since we started tracking (Dec 2020).

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Jupyter Notebook graph-neural-networks related posts

  • MIT largest open-source car design dataset, incl aerodynamics, to speed design

    2 projects | news.ycombinator.com | 7 Dec 2024

  • Gentle Introduction to Geometric Graph Neural Networks

    2 projects | news.ycombinator.com | 1 Feb 2023

  • Meet Graphein: a Python Library for Geometric Deep Learning and Network Analysis on Protein Structures and Interaction Networks

    1 project | /r/machinelearningnews | 27 Jan 2023

  • My network science / ML on graphs notebooks

    1 project | /r/learnmachinelearning | 4 Oct 2021

  • [Discussion] which NN architecture is best suitable for analysing the structural data of biomolecules

    1 project | /r/MachineLearning | 14 Apr 2021
  • A note from our sponsor - SaaSHub
    www.saashub.com | 9 Oct 2026
    SaaSHub helps you find the best software and product alternatives Learn more →

Index

What are some of the best open-source graph-neural-network projects in Jupyter Notebook? This list will help you:

# Project Stars
1 benchmarking-gnns 2,670
2 ktrain 1,267
3 graphein 1,196
4 geometric-gnn-dojo 524
5 indaba-pracs-2022 177
6 lagrangebench 77
7 netsci-labs 17
8 Topological-Reinforcement-Operator 3

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AppSignal knows why the f*#k it crashed.
Stop vibe-debugging. Every exception, every backtrace, grouped so you see patterns, not noise.
www.appsignal.com
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