serratus VS Camlistore

The Laboratory for RNA-Based Lifeforms | University of Toronto | Full-Time | ONSITE

We're a research computational biology lab at the forefront of RNA virus and virus-like agent discovery. Our goal is to help prevent the next pandemic by building the technical infrastructure to assist global virology research and public-health responses.

Seeking a full-stack developer who is creative, passionate, and willing to learn. No biology experience neccesary, but are a plus. Key assets: Python/R, AWS/HPC, postgres, javascript. See full job posting: http://rrna.ca/id0002

See: Serratus (https://serratus.io)

Serratus (https://github.com/ababaian/serratus) is an OSS bioinformatics project created by a passionate group of volunteers. Short story is we're re-analyzing all of the world's DNA/RNA sequencing data to find new viruses that other people have missed. It works surprisingly well, but there's a ton left to do.

There's also Perkeep [1], though it seems like development has slowed down on it in recent years.

[1]: https://perkeep.org/

You probably just want to pay the cost for hosted. But if you're set on running it yourself, https://perkeep.org/ is great

Perkeep

Not sure how actively it’s being developed but it sounds like perkeep is exactly the idea you’re looking for

So... it just occurred to me that you need to know about https://perkeep.org , I have been following it since the beginning when it was called Camlistore, and notably this talk https://www.youtube.com/watch?v=yxSzQIwXM1k ( from this page: https://perkeep.org/doc/ ).

If you want to live dangerously, this might eventually be useful: https://perkeep.org/