mars
Asynchronous Block-Level Storage Replication (by schoebel)
foldseek
Foldseek enables fast and sensitive comparisons of large structure sets. (by steineggerlab)
mars | foldseek | |
---|---|---|
1 | 1 | |
232 | 642 | |
- | 6.7% | |
7.3 | 9.3 | |
about 1 month ago | 6 days ago | |
C | C | |
GNU General Public License v3.0 only | GNU General Public License v3.0 only |
The number of mentions indicates the total number of mentions that we've tracked plus the number of user suggested alternatives.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
Stars - the number of stars that a project has on GitHub. Growth - month over month growth in stars.
Activity is a relative number indicating how actively a project is being developed. Recent commits have higher weight than older ones.
For example, an activity of 9.0 indicates that a project is amongst the top 10% of the most actively developed projects that we are tracking.
mars
Posts with mentions or reviews of mars.
We have used some of these posts to build our list of alternatives
and similar projects. The last one was on 2023-02-10.
-
Ask HN: How to distribute a lot of images throughout multiple Universities
If you're replicating one primary file system to many secondary systems, MARS might be helpful[1]. It was developed by 1&1, who hosts my personal website, along with petabytes of other people's stuff.
[1] https://github.com/schoebel/mars
foldseek
Posts with mentions or reviews of foldseek.
We have used some of these posts to build our list of alternatives
and similar projects.
-
AI predicts shape of nearly every known protein
"Some sophisticated applications of the expanded AlphaFold database might also depend on downloading its entire 23 terabyte contents, which won’t be feasible for many teams, Steinegger says. Cloud-based storage could also prove costly. Steinegger has co-developed a software tool called FoldSeek that can quickly find structurally similar proteins and which should be able to squash the AlphaFold data down considerably."
[FoldSeek Search](https://search.foldseek.com/search)
[Github:FoldSeek](https://github.com/steineggerlab/foldseek)
What are some alternatives?
When comparing mars and foldseek you can also consider the following projects:
bwa - Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
DAGSfM - Distributed and Graph-based Structure from Motion. This project includes the official implementation of our Pattern Recognition 2020 paper: Graph-Based Parallel Large Scale Structure from Motion.
hh-suite - Remote protein homology detection suite.
MooseFS - MooseFS – Open Source, Petabyte, Fault-Tolerant, Highly Performing, Scalable Network Distributed File System (Software-Defined Storage)
seqtk - Toolkit for processing sequences in FASTA/Q formats